Patrick Filima

Patrick Filima

Research Software Engineer

Computational Neuroscientist

© 2026 Patrick Filima

About Me

Background, research philosophy, and technical direction

I am a Research Software Engineer and Computational Neuroscientist working at the intersection of neuroscience, software engineering, and scientific computing.

My work focuses on transforming complex scientific workflows into reliable software platforms that improve how researchers collect, analyze, monitor, and share data. Combining an M.Sc. in Neuroscience with extensive software development experience, I bring both domain knowledge and engineering rigor to research challenges.

Background & Perspective

Bridging Neuroscience and Software Engineering

Scientific Domain Context

In computational neuroscience and neuroimaging, data pipelines are notoriously complex—often involving multi-gigabyte 3D volumes, specialized preprocessing toolchains (FSL, FreeSurfer, ANTs), and multi-day compute jobs across distributed HPC nodes.

Having conducted volumetric brain research and published peer-reviewed findings in neurodegenerative disorders and morphometry, I understand the friction points researchers face when dealing with pipeline crashes, unstandardized data formats, and manual log inspection.

Engineering Discipline

I apply modern software engineering principles—version control, continuous integration, containerization, observability, and intuitive UI design—to scientific computing problems.

Whether it is building an ELK-backed error monitoring dashboard for Brainlife.io, developing a companion mobile app for remote pipeline oversight, or creating digital applicant assessment systems for the African Brain Data Network, my goal is to build software that is stable, usable, and impactful.

Focus Areas

Areas of Specialization

Scientific Computing & Neuroinformatics

Building software infrastructure that makes complex neuroimaging analysis reproducible, accessible, and scalable across distributed HPC and cloud systems.

Neuroimaging workflow automation (MRI, fMRI, BIDS standards)
Integration with scientific toolchains (FSL, FreeSurfer, MNE)
FAIR data governance and open repository infrastructure

Full-Stack Software Engineering

Designing reliable applications for scientific, healthcare, and education environments with modern web and mobile technologies.

React, Next.js, and TypeScript frontend platforms
Python scientific backend services and REST APIs
Observability and pipeline diagnostics using the ELK stack

Open Science & Capacity Building

Leading collaborative initiatives and software projects that expand neuroscience research capacity and open data practices across Africa.

Digital evaluation platforms for pan-African academic programs
Technical workshops on scientific Python and neuroimaging data
Community platforms supporting 2,000+ researchers and clinicians
Timeline

Roles & Milestones

Detailed Experience

Research Software Engineer

Brainlife.io — University of Texas at Austin

2025 – Present

Developing workflow observability tools, error diagnostic dashboards, and mobile monitoring platforms for large-scale distributed neuroimaging pipelines.

Neuroinformatics & Technical Product Lead

African Brain Data Network (ABDN)

2023 – Present

Directing the architecture of digital platforms that promote FAIR data standards, fellowship evaluation workflows, and scientific collaboration across African institutions.

Wings Global Scholar

University of Oxford

2025 – 2026

Selected for advanced graduate training in computational neuroimaging, reproducible workflows, and high-throughput MRI data analysis.

Software Engineer

Lizard Global

2022 – 2024

Engineered commercial web and mobile products across workforce management, location services, and enterprise CMS platforms.

Academic Background

Master's Degree

M.Sc. Information Technology

Miva Open University (2026–2027)

Oxford Scholar

Wings Global Scholar

University of Oxford (2025–2026)

Graduate Degree

M.Sc. Neuroscience

University of Port Harcourt (2021–2023)

Undergraduate Degree

B.Sc. Anatomy

University of Port Harcourt (2014–2019)